Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.7■□□□□ 0.26
APOA4P06727 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 AC116407.3-201ENST00000623905 1129 ntBASIC16.7■□□□□ 0.26
APOA4P06727 AC117500.6-201ENST00000624871 588 ntBASIC16.7■□□□□ 0.26
APOA4P06727 PKD1P5-201ENST00000532415 10291 ntBASIC16.7■□□□□ 0.26
APOA4P06727 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.7■□□□□ 0.26
APOA4P06727 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
APOA4P06727 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 AC098831.1-202ENST00000438821 336 ntBASIC16.69■□□□□ 0.26
APOA4P06727 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
APOA4P06727 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
APOA4P06727 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.69■□□□□ 0.26
APOA4P06727 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APOA4P06727 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 MRPL20P1-201ENST00000400819 433 ntBASIC16.68■□□□□ 0.26
APOA4P06727 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.68■□□□□ 0.26
APOA4P06727 AC079776.4-201ENST00000511039 504 ntBASIC16.68■□□□□ 0.26
APOA4P06727 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.68■□□□□ 0.26
APOA4P06727 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms