Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AC243591.1-201ENST00000452967 1364 ntBASIC12.69□□□□□ -0.38
TCRAP04437 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AC092850.2-201ENST00000623821 2697 ntBASIC12.69□□□□□ -0.38
TCRAP04437 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AC022532.1-201ENST00000624563 1728 ntBASIC12.69□□□□□ -0.38
TCRAP04437 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 SPDYE21P-201ENST00000413323 827 ntBASIC12.69□□□□□ -0.38
TCRAP04437 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.69□□□□□ -0.38
TCRAP04437 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 KRT8P26-201ENST00000534154 1276 ntBASIC12.69□□□□□ -0.38
TCRAP04437 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRAP04437 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRAP04437 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TCRAP04437 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.69□□□□□ -0.38
TCRAP04437 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRAP04437 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AC004817.3-201ENST00000602957 2129 ntBASIC12.69□□□□□ -0.38
TCRAP04437 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 AL031731.1-201ENST00000642131 2094 ntBASIC12.69□□□□□ -0.38
TCRAP04437 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRAP04437 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TCRAP04437 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRAP04437 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 AL512652.2-201ENST00000625156 1716 ntBASIC12.68□□□□□ -0.38
TCRAP04437 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
TCRAP04437 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.68□□□□□ -0.38
TCRAP04437 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRAP04437 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRAP04437 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TCRAP04437 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRAP04437 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms