Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 AC099522.2-201ENST00000607001 744 ntBASIC12.84□□□□□ -0.35
TRBV12-3P01733 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.84□□□□□ -0.35
TRBV12-3P01733 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV12-3P01733 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.83□□□□□ -0.35
TRBV12-3P01733 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV12-3P01733 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV12-3P01733 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV12-3P01733 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRBV12-3P01733 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.83□□□□□ -0.35
TRBV12-3P01733 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 FER1L4-210ENST00000615531 5998 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 PMS2P4-201ENST00000412466 1052 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AC109635.5-201ENST00000533593 962 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 MTDHP5-201ENST00000598980 586 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AC092902.6-201ENST00000641783 218 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AC092364.2-201ENST00000596710 2692 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 AC016027.1-202ENST00000607927 1699 ntBASIC12.83□□□□□ -0.36
TRBV12-3P01733 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRBV12-3P01733 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 GPAA1P2-202ENST00000606848 1787 ntBASIC12.82□□□□□ -0.36
TRBV12-3P01733 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRBV12-3P01733 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.82□□□□□ -0.36
TRBV12-3P01733 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms