Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
IFNA1P01562 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
IFNA1P01562 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 PPT1-215ENST00000641471 2368 ntBASIC13.19□□□□□ -0.3
IFNA1P01562 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.19□□□□□ -0.3
IFNA1P01562 RN7SL471P-201ENST00000580476 299 ntBASIC13.19□□□□□ -0.3
IFNA1P01562 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
IFNA1P01562 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IFNA1P01562 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
IFNA1P01562 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFNA1P01562 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.18□□□□□ -0.3
IFNA1P01562 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
IFNA1P01562 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.18□□□□□ -0.3
IFNA1P01562 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.18□□□□□ -0.3
IFNA1P01562 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms