Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 PRAL-201ENST00000624952 3286 ntBASIC14.89□□□□□ -0.03
CDRT1O95170 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 AC007967.3-201ENST00000434308 558 ntBASIC14.89□□□□□ -0.03
CDRT1O95170 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.89□□□□□ -0.03
CDRT1O95170 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.89□□□□□ -0.03
CDRT1O95170 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDRT1O95170 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDRT1O95170 LINC00895-201ENST00000629028 1637 ntBASIC14.88□□□□□ -0.03
CDRT1O95170 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
CDRT1O95170 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.88□□□□□ -0.03
CDRT1O95170 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.88□□□□□ -0.03
CDRT1O95170 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 STK25P1-201ENST00000585406 838 ntBASIC14.88□□□□□ -0.03
CDRT1O95170 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDRT1O95170 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDRT1O95170 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.88□□□□□ -0.03
CDRT1O95170 AL049757.1-201ENST00000616842 1596 ntBASIC14.88□□□□□ -0.03
CDRT1O95170 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 GGT4P-201ENST00000623672 1708 ntBASIC14.88□□□□□ -0.03
CDRT1O95170 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDRT1O95170 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDRT1O95170 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
CDRT1O95170 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDRT1O95170 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.87□□□□□ -0.03
CDRT1O95170 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms