Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA3O95167 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 RNA5SP416-201ENST00000516838 111 ntBASIC13.3□□□□□ -0.28
NDUFA3O95167 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
NDUFA3O95167 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
NDUFA3O95167 AC140113.2-201ENST00000604370 208 ntBASIC13.3□□□□□ -0.28
NDUFA3O95167 AC021097.1-201ENST00000607902 574 ntBASIC13.3□□□□□ -0.28
NDUFA3O95167 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NDUFA3O95167 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 AL118508.1-201ENST00000613502 2345 ntBASIC13.3□□□□□ -0.28
NDUFA3O95167 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA3O95167 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA3O95167 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA3O95167 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NDUFA3O95167 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 MED15P5-201ENST00000423150 992 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 KRT18P2-201ENST00000447938 1258 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.29□□□□□ -0.28
NDUFA3O95167 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.29□□□□□ -0.28
NDUFA3O95167 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.29□□□□□ -0.28
NDUFA3O95167 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 AC109635.5-201ENST00000533593 962 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.29□□□□□ -0.28
NDUFA3O95167 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 KRT19P2-202ENST00000557173 1012 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFA3O95167 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 AC004877.2-201ENST00000623941 599 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 BCAR1-209ENST00000546196 1340 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 GPAA1P2-202ENST00000606848 1787 ntBASIC13.29□□□□□ -0.28
NDUFA3O95167 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NDUFA3O95167 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
NDUFA3O95167 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NDUFA3O95167 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFA3O95167 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms