Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFDN1O60925 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PFDN1O60925 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.84□□□□□ -0.03
PFDN1O60925 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.84□□□□□ -0.03
PFDN1O60925 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PFDN1O60925 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.84□□□□□ -0.03
PFDN1O60925 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.83□□□□□ -0.03
PFDN1O60925 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 AL031595.1-201ENST00000623969 4709 ntBASIC14.83□□□□□ -0.03
PFDN1O60925 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFDN1O60925 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.83□□□□□ -0.03
PFDN1O60925 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.83□□□□□ -0.04
PFDN1O60925 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.83□□□□□ -0.04
PFDN1O60925 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.83□□□□□ -0.04
PFDN1O60925 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 SLC25A1P3-201ENST00000395415 828 ntBASIC14.83□□□□□ -0.04
PFDN1O60925 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.83□□□□□ -0.04
PFDN1O60925 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 AL390719.1-204ENST00000412397 1219 ntBASIC14.83□□□□□ -0.04
PFDN1O60925 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.83□□□□□ -0.04
PFDN1O60925 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.83□□□□□ -0.04
PFDN1O60925 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.83□□□□□ -0.04
PFDN1O60925 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 AC010536.3-201ENST00000620306 533 ntBASIC14.83□□□□□ -0.04
PFDN1O60925 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.83□□□□□ -0.04
PFDN1O60925 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PFDN1O60925 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PFDN1O60925 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PFDN1O60925 LINC02228-203ENST00000641970 1355 ntBASIC14.83□□□□□ -0.04
PFDN1O60925 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PFDN1O60925 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFDN1O60925 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PFDN1O60925 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 EDA-201ENST00000338901 1233 ntBASIC14.82□□□□□ -0.04
PFDN1O60925 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.82□□□□□ -0.04
PFDN1O60925 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.82□□□□□ -0.04
PFDN1O60925 AC091305.1-201ENST00000479476 895 ntBASIC14.82□□□□□ -0.04
PFDN1O60925 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.82□□□□□ -0.04
PFDN1O60925 KRT18P16-201ENST00000510337 1294 ntBASIC14.82□□□□□ -0.04
PFDN1O60925 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.82□□□□□ -0.04
PFDN1O60925 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.82□□□□□ -0.04
PFDN1O60925 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.82□□□□□ -0.04
PFDN1O60925 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.82□□□□□ -0.04
PFDN1O60925 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFDN1O60925 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFDN1O60925 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms