Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 KRT18P2-201ENST00000447938 1258 ntBASIC17.41■□□□□ 0.38
OPHN1O60890 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.41■□□□□ 0.38
OPHN1O60890 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
OPHN1O60890 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 PCDHA14-201ENST00000506751 2298 ntBASIC17.41■□□□□ 0.38
OPHN1O60890 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OPHN1O60890 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.41■□□□□ 0.38
OPHN1O60890 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.4■□□□□ 0.38
OPHN1O60890 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
OPHN1O60890 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
OPHN1O60890 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.4■□□□□ 0.38
OPHN1O60890 AL645939.2-201ENST00000427340 991 ntBASIC17.4■□□□□ 0.38
OPHN1O60890 CNN2P11-201ENST00000429351 262 ntBASIC17.4■□□□□ 0.38
OPHN1O60890 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.4■□□□□ 0.38
OPHN1O60890 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.4■□□□□ 0.38
OPHN1O60890 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.4■□□□□ 0.38
OPHN1O60890 AC092364.2-202ENST00000597012 1073 ntBASIC17.4■□□□□ 0.38
OPHN1O60890 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
OPHN1O60890 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
OPHN1O60890 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OPHN1O60890 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
OPHN1O60890 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.39■□□□□ 0.38
OPHN1O60890 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
OPHN1O60890 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.39■□□□□ 0.38
OPHN1O60890 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
OPHN1O60890 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
OPHN1O60890 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.39■□□□□ 0.37
OPHN1O60890 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
OPHN1O60890 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.39■□□□□ 0.37
OPHN1O60890 HTR5BP-201ENST00000430851 1154 ntBASIC17.39■□□□□ 0.37
OPHN1O60890 ALG1L5P-201ENST00000482043 771 ntBASIC17.39■□□□□ 0.37
OPHN1O60890 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
OPHN1O60890 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.37
OPHN1O60890 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
OPHN1O60890 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OPHN1O60890 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
OPHN1O60890 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
OPHN1O60890 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
OPHN1O60890 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.38■□□□□ 0.37
OPHN1O60890 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPHN1O60890 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms