Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 AC144831.1-201ENST00000573312 2656 ntBASIC14.79□□□□□ -0.04
GMDSO60547 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GMDSO60547 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 AC148477.5-201ENST00000625164 1645 ntBASIC14.78□□□□□ -0.04
GMDSO60547 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 FRMD8P1-201ENST00000440433 1524 ntBASIC14.78□□□□□ -0.04
GMDSO60547 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 ACTG1P4-201ENST00000425123 1122 ntBASIC14.78□□□□□ -0.04
GMDSO60547 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.78□□□□□ -0.04
GMDSO60547 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GMDSO60547 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.78□□□□□ -0.04
GMDSO60547 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GMDSO60547 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GMDSO60547 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
GMDSO60547 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
GMDSO60547 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.77□□□□□ -0.04
GMDSO60547 AC092384.3-202ENST00000564646 2873 ntBASIC14.77□□□□□ -0.04
GMDSO60547 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 AC104640.1-201ENST00000562617 2109 ntBASIC14.77□□□□□ -0.04
GMDSO60547 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GMDSO60547 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.77□□□□□ -0.04
GMDSO60547 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GMDSO60547 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GMDSO60547 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.77□□□□□ -0.05
GMDSO60547 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.77□□□□□ -0.05
GMDSO60547 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GMDSO60547 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.77□□□□□ -0.05
GMDSO60547 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.77□□□□□ -0.05
GMDSO60547 AC008608.2-201ENST00000606089 416 ntBASIC14.77□□□□□ -0.05
GMDSO60547 IFNL4P1-201ENST00000607083 540 ntBASIC14.77□□□□□ -0.05
GMDSO60547 AC012313.10-201ENST00000623509 926 ntBASIC14.77□□□□□ -0.05
GMDSO60547 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.77□□□□□ -0.05
GMDSO60547 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
GMDSO60547 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GMDSO60547 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.77□□□□□ -0.05
GMDSO60547 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GMDSO60547 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.77□□□□□ -0.05
GMDSO60547 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 AC099063.4-201ENST00000641099 1602 ntBASIC14.77□□□□□ -0.05
GMDSO60547 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.77□□□□□ -0.05
GMDSO60547 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GMDSO60547 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms