Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC3O60481 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.91□□□□□ -0.02
ZIC3O60481 TSEN15P1-201ENST00000423257 515 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 KRT18P32-201ENST00000424695 1287 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 AC142381.1-201ENST00000426099 345 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 GPS2P2-201ENST00000430745 888 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC3O60481 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC3O60481 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 AC105233.2-201ENST00000523697 349 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 AF228730.5-201ENST00000530288 346 ntBASIC14.91□□□□□ -0.02
ZIC3O60481 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC3O60481 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.91□□□□□ -0.02
ZIC3O60481 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.91□□□□□ -0.02
ZIC3O60481 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ZIC3O60481 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 LINC01144-201ENST00000626198 1710 ntBASIC14.9□□□□□ -0.02
ZIC3O60481 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.9□□□□□ -0.02
ZIC3O60481 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 AC093724.1-201ENST00000448659 1027 ntBASIC14.9□□□□□ -0.02
ZIC3O60481 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
ZIC3O60481 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.9□□□□□ -0.02
ZIC3O60481 AC109322.1-201ENST00000524499 1264 ntBASIC14.9□□□□□ -0.02
ZIC3O60481 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
ZIC3O60481 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.9□□□□□ -0.02
ZIC3O60481 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.9□□□□□ -0.02
ZIC3O60481 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ZIC3O60481 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZIC3O60481 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.9□□□□□ -0.02
ZIC3O60481 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms