Protein–RNA interactions for Protein: O43653

PSCA, Prostate stem cell antigen, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSCAO43653 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.33□□□□□ -0.6
PSCAO43653 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 TNRC18P3-201ENST00000441896 2691 ntBASIC11.33□□□□□ -0.6
PSCAO43653 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.33□□□□□ -0.6
PSCAO43653 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.33□□□□□ -0.6
PSCAO43653 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.33□□□□□ -0.6
PSCAO43653 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.33□□□□□ -0.6
PSCAO43653 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
PSCAO43653 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.33□□□□□ -0.6
PSCAO43653 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PSCAO43653 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PSCAO43653 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 AL023806.1-201ENST00000603994 1649 ntBASIC11.32□□□□□ -0.6
PSCAO43653 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.32□□□□□ -0.6
PSCAO43653 YBX2P1-201ENST00000394192 760 ntBASIC11.32□□□□□ -0.6
PSCAO43653 UPF3AP3-201ENST00000420996 769 ntBASIC11.32□□□□□ -0.6
PSCAO43653 PAWRP1-201ENST00000451083 565 ntBASIC11.32□□□□□ -0.6
PSCAO43653 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.32□□□□□ -0.6
PSCAO43653 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.32□□□□□ -0.6
PSCAO43653 PGAM5P1-201ENST00000518923 814 ntBASIC11.32□□□□□ -0.6
PSCAO43653 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.32□□□□□ -0.6
PSCAO43653 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.32□□□□□ -0.6
PSCAO43653 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.32□□□□□ -0.6
PSCAO43653 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 AC099398.1-201ENST00000567919 2776 ntBASIC11.32□□□□□ -0.6
PSCAO43653 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
PSCAO43653 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PSCAO43653 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PSCAO43653 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.31□□□□□ -0.6
PSCAO43653 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC11.31□□□□□ -0.6
PSCAO43653 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.31□□□□□ -0.6
PSCAO43653 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PSCAO43653 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 PRORSD1P-202ENST00000563365 2154 ntBASIC11.31□□□□□ -0.6
PSCAO43653 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PSCAO43653 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.31□□□□□ -0.6
PSCAO43653 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PSCAO43653 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PSCAO43653 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PSCAO43653 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms