Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.91■□□□□ 0.3
RIPK2O43353 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RIPK2O43353 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.91■□□□□ 0.3
RIPK2O43353 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.91■□□□□ 0.3
RIPK2O43353 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RIPK2O43353 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RIPK2O43353 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
RIPK2O43353 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 KRT17P6-201ENST00000453795 1220 ntBASIC16.9■□□□□ 0.3
RIPK2O43353 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.9■□□□□ 0.3
RIPK2O43353 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 AC010654.1-201ENST00000615722 808 ntBASIC16.9■□□□□ 0.3
RIPK2O43353 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RIPK2O43353 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RIPK2O43353 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RIPK2O43353 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPK2O43353 TNRC18P2-201ENST00000417666 2714 ntBASIC16.9■□□□□ 0.3
RIPK2O43353 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
RIPK2O43353 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RIPK2O43353 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.89■□□□□ 0.3
RIPK2O43353 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RIPK2O43353 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RIPK2O43353 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RIPK2O43353 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RIPK2O43353 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.89■□□□□ 0.29
RIPK2O43353 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.89■□□□□ 0.29
RIPK2O43353 AC006058.4-201ENST00000624016 1670 ntBASIC16.89■□□□□ 0.29
RIPK2O43353 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RIPK2O43353 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
RIPK2O43353 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 IGHV3-47-201ENST00000425060 335 ntBASIC16.89■□□□□ 0.29
RIPK2O43353 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.89■□□□□ 0.29
RIPK2O43353 ABCD1P5-201ENST00000445663 754 ntBASIC16.89■□□□□ 0.29
RIPK2O43353 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.89■□□□□ 0.29
RIPK2O43353 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.89■□□□□ 0.29
RIPK2O43353 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RIPK2O43353 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.89■□□□□ 0.29
RIPK2O43353 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RIPK2O43353 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIPK2O43353 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms