Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.45□□□□□ -0.1
PHF1O43189 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
PHF1O43189 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHF1O43189 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF1O43189 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 LINC02012-201ENST00000608206 1725 ntBASIC14.44□□□□□ -0.1
PHF1O43189 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 AC097637.2-201ENST00000624096 1997 ntBASIC14.44□□□□□ -0.1
PHF1O43189 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 ALG1L5P-201ENST00000482043 771 ntBASIC14.44□□□□□ -0.1
PHF1O43189 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.44□□□□□ -0.1
PHF1O43189 AL589182.2-201ENST00000619332 1049 ntBASIC14.44□□□□□ -0.1
PHF1O43189 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF1O43189 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF1O43189 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF1O43189 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 NCF1C-201ENST00000438382 1427 ntBASIC14.43□□□□□ -0.1
PHF1O43189 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 AC092474.2-201ENST00000424288 719 ntBASIC14.43□□□□□ -0.1
PHF1O43189 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.43□□□□□ -0.1
PHF1O43189 PAWRP1-201ENST00000451083 565 ntBASIC14.43□□□□□ -0.1
PHF1O43189 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.43□□□□□ -0.1
PHF1O43189 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF1O43189 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.43□□□□□ -0.1
PHF1O43189 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.43□□□□□ -0.1
PHF1O43189 AL139327.4-201ENST00000612362 153 ntBASIC14.43□□□□□ -0.1
PHF1O43189 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
PHF1O43189 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF1O43189 AC068587.6-202ENST00000641839 5619 ntBASIC14.43□□□□□ -0.1
PHF1O43189 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF1O43189 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms