Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHGDHO43175 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
PHGDHO43175 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PHGDHO43175 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PHGDHO43175 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PHGDHO43175 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PHGDHO43175 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PHGDHO43175 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHGDHO43175 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.58■□□□□ 0.25
PHGDHO43175 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.58■□□□□ 0.25
PHGDHO43175 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PHGDHO43175 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PHGDHO43175 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PHGDHO43175 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PHGDHO43175 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.58■□□□□ 0.24
PHGDHO43175 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.58■□□□□ 0.24
PHGDHO43175 AC107918.2-201ENST00000530817 355 ntBASIC16.58■□□□□ 0.24
PHGDHO43175 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.58■□□□□ 0.24
PHGDHO43175 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.58■□□□□ 0.24
PHGDHO43175 AC091167.2-201ENST00000579581 588 ntBASIC16.58■□□□□ 0.24
PHGDHO43175 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 AC107918.4-202ENST00000641623 219 ntBASIC16.58■□□□□ 0.24
PHGDHO43175 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PHGDHO43175 KRT8P39-201ENST00000396270 1433 ntBASIC16.58■□□□□ 0.24
PHGDHO43175 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PHGDHO43175 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHGDHO43175 PKD1P5-201ENST00000532415 10291 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 RPS2P1-201ENST00000434010 821 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 RPS15P9-201ENST00000494093 319 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 AC006557.2-201ENST00000592985 1240 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 LINC01711-201ENST00000598340 967 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 IFNL4P1-201ENST00000607083 540 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.57■□□□□ 0.24
PHGDHO43175 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
PHGDHO43175 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.57■□□□□ 0.24
PHGDHO43175 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.57■□□□□ 0.24
PHGDHO43175 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHGDHO43175 AL596087.1-201ENST00000400979 1969 ntBASIC16.57■□□□□ 0.24
PHGDHO43175 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 AC022188.1-201ENST00000620960 1664 ntBASIC16.56■□□□□ 0.24
PHGDHO43175 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 AL596257.1-201ENST00000641463 2694 ntBASIC16.56■□□□□ 0.24
PHGDHO43175 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
PHGDHO43175 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms