Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 HNRNPA1P32-201ENST00000396326 963 ntBASIC26.28■■□□□ 1.8
CHD1O14646 AL590640.2-201ENST00000457038 527 ntBASIC26.28■■□□□ 1.8
CHD1O14646 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1O14646 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CHD1O14646 AC016396.2-201ENST00000562575 1417 ntBASIC26.27■■□□□ 1.8
CHD1O14646 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC26.27■■□□□ 1.8
CHD1O14646 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 ACR-203ENST00000529621 708 ntTSL 5 BASIC26.27■■□□□ 1.8
CHD1O14646 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC26.27■■□□□ 1.8
CHD1O14646 AP001505.2-201ENST00000616815 443 ntBASIC26.27■■□□□ 1.8
CHD1O14646 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CHD1O14646 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC26.27■■□□□ 1.8
CHD1O14646 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1O14646 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC26.26■■□□□ 1.79
CHD1O14646 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC26.26■■□□□ 1.79
CHD1O14646 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC26.26■■□□□ 1.79
CHD1O14646 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1O14646 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1O14646 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC26.25■■□□□ 1.79
CHD1O14646 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC26.25■■□□□ 1.79
CHD1O14646 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC26.25■■□□□ 1.79
CHD1O14646 AC078819.1-201ENST00000547454 765 ntBASIC26.25■■□□□ 1.79
CHD1O14646 AC012085.1-201ENST00000548270 765 ntBASIC26.25■■□□□ 1.79
CHD1O14646 AC138951.2-201ENST00000623455 1161 ntBASIC26.25■■□□□ 1.79
CHD1O14646 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC26.25■■□□□ 1.79
CHD1O14646 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC26.25■■□□□ 1.79
CHD1O14646 AC012317.2-201ENST00000623305 2251 ntBASIC26.25■■□□□ 1.79
CHD1O14646 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHD1O14646 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 RELA-227ENST00000615805 2236 ntTSL 5 BASIC26.25■■□□□ 1.79
CHD1O14646 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 RPL13AP25-201ENST00000484130 612 ntBASIC26.25■■□□□ 1.79
CHD1O14646 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC26.25■■□□□ 1.79
CHD1O14646 MIR7845-201ENST00000618396 99 ntBASIC26.25■■□□□ 1.79
CHD1O14646 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1O14646 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD1O14646 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD1O14646 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC26.24■■□□□ 1.79
CHD1O14646 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CHD1O14646 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
CHD1O14646 GUK1-206ENST00000366723 845 ntTSL 5 BASIC26.24■■□□□ 1.79
CHD1O14646 HLA-DQB2-229ENST00000411527 1059 ntBASIC26.24■■□□□ 1.79
CHD1O14646 KRT18P64-201ENST00000434946 1219 ntBASIC26.24■■□□□ 1.79
CHD1O14646 TARDBPP1-201ENST00000442013 1203 ntBASIC26.24■■□□□ 1.79
CHD1O14646 AC009486.1-201ENST00000569860 813 ntBASIC26.24■■□□□ 1.79
CHD1O14646 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC26.24■■□□□ 1.79
CHD1O14646 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC26.24■■□□□ 1.79
CHD1O14646 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD1O14646 AL451050.2-201ENST00000606967 682 ntBASIC26.24■■□□□ 1.79
CHD1O14646 AC244452.3-201ENST00000636814 210 ntBASIC26.24■■□□□ 1.79
CHD1O14646 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms