Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.46■□□□□ 0.22
TLR4O00206 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TLR4O00206 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TLR4O00206 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
TLR4O00206 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 CROCCP1-201ENST00000426910 5675 ntBASIC16.45■□□□□ 0.22
TLR4O00206 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.45■□□□□ 0.22
TLR4O00206 UGT1A2P-201ENST00000454886 866 ntBASIC16.45■□□□□ 0.22
TLR4O00206 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 KRT18P34-201ENST00000488218 1270 ntBASIC16.45■□□□□ 0.22
TLR4O00206 RN7SL204P-201ENST00000582831 262 ntBASIC16.45■□□□□ 0.22
TLR4O00206 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR4O00206 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TLR4O00206 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR4O00206 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TLR4O00206 NKILA-202ENST00000614771 2598 ntBASIC16.44■□□□□ 0.22
TLR4O00206 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TLR4O00206 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TLR4O00206 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.44■□□□□ 0.22
TLR4O00206 AC105233.2-201ENST00000523697 349 ntBASIC16.44■□□□□ 0.22
TLR4O00206 AF228730.5-201ENST00000530288 346 ntBASIC16.44■□□□□ 0.22
TLR4O00206 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.44■□□□□ 0.22
TLR4O00206 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TLR4O00206 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR4O00206 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR4O00206 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TLR4O00206 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.43■□□□□ 0.22
TLR4O00206 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.43■□□□□ 0.22
TLR4O00206 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TLR4O00206 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.43■□□□□ 0.22
TLR4O00206 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.43■□□□□ 0.22
TLR4O00206 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.43■□□□□ 0.22
TLR4O00206 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms