Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX39AO00148 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DDX39AO00148 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX39AO00148 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX39AO00148 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX39AO00148 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX39AO00148 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX39AO00148 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX39AO00148 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX39AO00148 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
DDX39AO00148 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DDX39AO00148 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX39AO00148 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX39AO00148 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX39AO00148 HLA-J-203ENST00000494367 1087 ntBASIC18.66■□□□□ 0.58
DDX39AO00148 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX39AO00148 AC008267.7-201ENST00000624570 1194 ntBASIC18.66■□□□□ 0.58
DDX39AO00148 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX39AO00148 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX39AO00148 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX39AO00148 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX39AO00148 AC092171.3-201ENST00000610122 2651 ntBASIC18.66■□□□□ 0.58
DDX39AO00148 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX39AO00148 AL031731.1-201ENST00000642131 2094 ntBASIC18.65■□□□□ 0.58
DDX39AO00148 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DDX39AO00148 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
DDX39AO00148 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX39AO00148 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX39AO00148 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DDX39AO00148 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.65■□□□□ 0.58
DDX39AO00148 AL645939.2-201ENST00000427340 991 ntBASIC18.65■□□□□ 0.58
DDX39AO00148 GPS2P2-201ENST00000430745 888 ntBASIC18.65■□□□□ 0.58
DDX39AO00148 RFPL4AP1-201ENST00000530883 850 ntBASIC18.65■□□□□ 0.58
DDX39AO00148 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 AP000842.3-202ENST00000569238 1080 ntBASIC18.65■□□□□ 0.58
DDX39AO00148 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DDX39AO00148 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
DDX39AO00148 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX39AO00148 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX39AO00148 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX39AO00148 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX39AO00148 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX39AO00148 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX39AO00148 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX39AO00148 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX39AO00148 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.64■□□□□ 0.57
DDX39AO00148 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX39AO00148 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX39AO00148 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX39AO00148 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX39AO00148 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms