Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 PRAL-201ENST00000624952 3286 ntBASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AL671277.2-201ENST00000458060 996 ntBASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AP005901.3-202ENST00000581653 237 ntBASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AC011498.5-201ENST00000592027 486 ntBASIC14.25□□□□□ -0.13
TMEM235A6NFC5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM235A6NFC5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AC243591.1-201ENST00000452967 1364 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AC002310.6-201ENST00000624451 1377 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 KRT8P26-201ENST00000534154 1276 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 AC073347.1-201ENST00000421633 2643 ntBASIC14.24□□□□□ -0.13
TMEM235A6NFC5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms