Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 PRORSD1P-202ENST00000563365 2154 ntBASIC24.28■■□□□ 1.48
HFM1A2PYH4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
HFM1A2PYH4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HFM1A2PYH4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 SPDYE17-201ENST00000412399 783 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 RPL37AP1-201ENST00000412502 279 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 UGT1A2P-201ENST00000454886 866 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 AL079307.3-201ENST00000556114 283 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 ZNF890P-202ENST00000530367 1156 ntBASIC24.27■■□□□ 1.48
HFM1A2PYH4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.27■■□□□ 1.48
HFM1A2PYH4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HFM1A2PYH4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC24.27■■□□□ 1.47
HFM1A2PYH4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 CETN4P-206ENST00000642099 2168 ntBASIC24.26■■□□□ 1.47
HFM1A2PYH4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 AC009053.2-201ENST00000563701 2365 ntBASIC24.26■■□□□ 1.47
HFM1A2PYH4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
HFM1A2PYH4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms