Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 NORAD-201ENST00000565493 5339 ntBASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TOP3BP1-201ENST00000420768 1380 ntBASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AL020989.1-201ENST00000422979 469 ntBASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 SSR4P1-203ENST00000599569 2260 ntBASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AC148477.5-201ENST00000625164 1645 ntBASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.65□□□□□ -0.06
TRDV1A0A1B0GX56 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRDV1A0A1B0GX56 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRDV1A0A1B0GX56 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 PMPCAP1-201ENST00000508114 1576 ntBASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 AC006486.2-201ENST00000624246 2199 ntBASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 LIN28AP1-201ENST00000429574 405 ntBASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 NFIC-211ENST00000641145 8399 ntBASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRDV1A0A1B0GX56 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRDV1A0A1B0GX56 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms