Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF103-CHMP3A0A140T963 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 ACTG1P4-201ENST00000425123 1122 ntBASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC138894.3-201ENST00000603787 634 ntBASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC093458.2-201ENST00000623150 629 ntBASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF103-CHMP3A0A140T963 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC097637.2-201ENST00000624096 1997 ntBASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 ABCD1P5-201ENST00000445663 754 ntBASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 MIR5100-201ENST00000579544 119 ntBASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 SIGLEC16-201ENST00000599858 1437 ntBASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF103-CHMP3A0A140T963 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms