Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC064862.7-201ENST00000604520 867 ntBASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL022326.1-202ENST00000641533 845 ntBASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 GGT3P-204ENST00000453783 1664 ntBASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV6-7A0A0A0MS04 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AP005117.1-202ENST00000581724 1908 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC132008.2-207ENST00000454517 770 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 BX005266.1-201ENST00000473402 457 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC106795.1-205ENST00000512851 1056 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC010491.1-201ENST00000563101 2797 ntBASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.94□□□□□ -0.18
TRBV6-7A0A0A0MS04 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC092119.3-201ENST00000612618 583 ntBASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AL589182.2-201ENST00000619332 1049 ntBASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-7A0A0A0MS04 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms