Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 PAWRP1-201ENST00000451083 565 ntBASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 AL356488.2-201ENST00000602755 427 ntBASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 HLA-A-202ENST00000376806 1854 ntBASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV1A0A0A0MS02 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LINC00895-201ENST00000629028 1637 ntBASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC002310.6-201ENST00000624451 1377 ntBASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC079781.3-201ENST00000449110 356 ntBASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 PGM5P2-202ENST00000637225 1043 ntBASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV1A0A0A0MS02 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms