Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL158211.3-201ENST00000607385 239 ntBASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 AC063926.2-201ENST00000623766 1308 ntBASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA9Q9Y5G4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC00304-203ENST00000565008 1864 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 HCG4-201ENST00000418983 998 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC002472.2-201ENST00000442739 958 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 TSPY16P-201ENST00000449843 468 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC026150.2-201ENST00000564693 1156 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AL353732.1-201ENST00000569618 1459 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 AC106886.4-201ENST00000623557 2502 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 UXT-AS1-201ENST00000590504 1525 ntBASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA9Q9Y5G4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 AC236430.1-201ENST00000402231 743 ntBASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 SPDYE14P-201ENST00000442619 822 ntBASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 RN7SL204P-201ENST00000582831 262 ntBASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 WASH6P-202ENST00000359512 1437 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms