Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 HLA-F-220ENST00000434407 884 ntBASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 STK25P1-201ENST00000585406 838 ntBASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERGIC3Q9Y282 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AL365209.1-201ENST00000624418 6473 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 CICP14-201ENST00000629111 2732 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AL049757.1-201ENST00000616842 1596 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AC122714.2-201ENST00000502787 707 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 ZNF444P1-201ENST00000559497 298 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AL603832.2-201ENST00000566195 2125 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 GPR32P1-201ENST00000601788 811 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 Z99916.2-201ENST00000604037 246 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 AL596087.1-201ENST00000400979 1969 ntBASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERGIC3Q9Y282 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC005089.1-201ENST00000619486 2241 ntBASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms