Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 AL009183.1-201ENST00000603760 355 ntBASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SORCS3Q9UPU3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 HMGA1P7-201ENST00000406908 502 ntBASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SORCS3Q9UPU3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 LINC00304-203ENST00000565008 1864 ntBASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SORCS3Q9UPU3 AC046185.3-201ENST00000623228 1824 ntBASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 ARSEP1-201ENST00000420443 635 ntBASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
SORCS3Q9UPU3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.5■□□□□ 0.39
SORCS3Q9UPU3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms