Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AC129492.6-201ENST00000611383 1305 ntBASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 KRT18P27-201ENST00000427733 1299 ntBASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TERC-201ENST00000602385 541 ntBASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AC079781.3-201ENST00000449110 356 ntBASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 RPS15P9-201ENST00000494093 319 ntBASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AC008667.4-201ENST00000607370 168 ntBASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AP001350.2-201ENST00000625104 1094 ntBASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 FAM215A-202ENST00000632077 792 ntBASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC00474Q9P2X8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms