Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 GGT3P-204ENST00000453783 1664 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AC002056.1-201ENST00000395613 760 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 RPSAP43-201ENST00000402237 625 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AC005829.1-201ENST00000570002 483 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AC020765.3-201ENST00000613051 740 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AC092919.2-201ENST00000623631 1645 ntBASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.74■□□□□ 0.11
PRDM9Q9NQV7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 RNU1-129P-201ENST00000384064 167 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 FAM58CP-201ENST00000435741 640 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AC112482.1-201ENST00000492080 688 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 U1.21-201ENST00000580816 167 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AL078644.1-201ENST00000609881 752 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AC091812.2-201ENST00000619081 385 ntBASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PRDM9Q9NQV7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 AC046158.3-201ENST00000624947 2558 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms