Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 AL118508.1-201ENST00000613502 2345 ntBASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
ATP6V0A4Q9HBG4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC016027.1-202ENST00000607927 1699 ntBASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 KRT8P48-201ENST00000515599 1220 ntBASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 LINC00628-201ENST00000628516 1289 ntBASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AL603756.1-201ENST00000606511 2163 ntBASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6V0A4Q9HBG4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 CICP6-201ENST00000457191 2729 ntBASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATP6V0A4Q9HBG4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms