Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AC010327.4-202ENST00000591484 748 ntBASIC15.43■□□□□ 0.06
UBQLN3Q9H347 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AC007064.4-201ENST00000637740 555 ntBASIC15.43■□□□□ 0.06
UBQLN3Q9H347 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.43■□□□□ 0.06
UBQLN3Q9H347 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 AC046158.3-201ENST00000624947 2558 ntBASIC15.42■□□□□ 0.06
UBQLN3Q9H347 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 MIR1233-2-201ENST00000408138 82 ntBASIC15.42■□□□□ 0.06
UBQLN3Q9H347 MIR1233-1-201ENST00000408722 82 ntBASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 DUX4L17-201ENST00000557360 1267 ntBASIC15.42■□□□□ 0.06
UBQLN3Q9H347 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 AC025580.3-201ENST00000617932 1424 ntBASIC15.42■□□□□ 0.06
UBQLN3Q9H347 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN3Q9H347 AC008741.2-201ENST00000612792 3115 ntBASIC15.41■□□□□ 0.06
UBQLN3Q9H347 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN3Q9H347 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms