Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 TSPY17P-201ENST00000450329 467 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 CR769767.2-201ENST00000622735 460 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AC005912.2-201ENST00000619492 2400 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 AC087386.2-201ENST00000623212 4637 ntBASIC13.53□□□□□ -0.24
NKX6-2Q9C056 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-2Q9C056 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 CICP23-201ENST00000605013 2741 ntBASIC13.52□□□□□ -0.24
NKX6-2Q9C056 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-2Q9C056 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AC113404.2-201ENST00000507884 177 ntBASIC13.52□□□□□ -0.25
NKX6-2Q9C056 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AL391256.1-201ENST00000443260 1855 ntBASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-2Q9C056 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms