Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 CTBP2P3-201ENST00000585629 1255 ntBASIC21.32■■□□□ 1
PCDH11YQ9BZA8 AC093726.1-201ENST00000608064 963 ntBASIC21.32■■□□□ 1
PCDH11YQ9BZA8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 NOC2LP2-201ENST00000407594 1944 ntBASIC21.32■■□□□ 1
PCDH11YQ9BZA8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH11YQ9BZA8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 RPS2P32-201ENST00000439199 892 ntBASIC21.31■■□□□ 1
PCDH11YQ9BZA8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 PP12613-201ENST00000424958 2230 ntBASIC21.31■■□□□ 1
PCDH11YQ9BZA8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH11YQ9BZA8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH11YQ9BZA8 MIR658-201ENST00000385210 100 ntBASIC21.29■■□□□ 1
PCDH11YQ9BZA8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AC098850.1-201ENST00000419919 790 ntBASIC21.29■■□□□ 1
PCDH11YQ9BZA8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 RRP7BP-205ENST00000566851 833 ntBASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.29■■□□□ 1
PCDH11YQ9BZA8 AC074044.1-201ENST00000609673 707 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms