Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 KRT8P39-201ENST00000396270 1433 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 CHCHD2P8-201ENST00000429873 447 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 SRPK2P-201ENST00000523408 1100 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC022616.7-201ENST00000525383 220 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AL353135.1-201ENST00000606729 504 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TNRC18P2-201ENST00000417666 2714 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AL356309.3-201ENST00000624132 1934 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PPT1-215ENST00000641471 2368 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 PRAL-201ENST00000624952 3286 ntBASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC8.48□□□□□ -1.05
KRTAP3-1Q9BYR8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP3-1Q9BYR8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms