Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.28■□□□□ 0.36
LRRC3Q9BY71 AC080080.1-201ENST00000625121 2420 ntBASIC17.28■□□□□ 0.36
LRRC3Q9BY71 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 HLA-H-201ENST00000383620 1096 ntBASIC17.28■□□□□ 0.36
LRRC3Q9BY71 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 AL138828.2-201ENST00000615812 383 ntBASIC17.28■□□□□ 0.36
LRRC3Q9BY71 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC3Q9BY71 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.27■□□□□ 0.36
LRRC3Q9BY71 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 AL512638.1-201ENST00000457493 794 ntBASIC17.27■□□□□ 0.36
LRRC3Q9BY71 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 BANF1P1-201ENST00000553684 263 ntBASIC17.27■□□□□ 0.36
LRRC3Q9BY71 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 AL139011.1-202ENST00000642063 584 ntBASIC17.27■□□□□ 0.36
LRRC3Q9BY71 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC3Q9BY71 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC3Q9BY71 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 AC099398.1-201ENST00000567919 2776 ntBASIC17.26■□□□□ 0.35
LRRC3Q9BY71 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 AC098859.1-201ENST00000502915 1238 ntBASIC17.26■□□□□ 0.35
LRRC3Q9BY71 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.26■□□□□ 0.35
LRRC3Q9BY71 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC3Q9BY71 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms