Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VGLL1Q99990 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 KRT8P49-201ENST00000604166 1432 ntBASIC12.69□□□□□ -0.38
VGLL1Q99990 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 TCAF2P1-201ENST00000291129 2421 ntBASIC12.69□□□□□ -0.38
VGLL1Q99990 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.69□□□□□ -0.38
VGLL1Q99990 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.69□□□□□ -0.38
VGLL1Q99990 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VGLL1Q99990 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VGLL1Q99990 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC126755.1-201ENST00000525846 6405 ntBASIC12.68□□□□□ -0.38
VGLL1Q99990 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.68□□□□□ -0.38
VGLL1Q99990 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC114341.1-201ENST00000618070 349 ntBASIC12.68□□□□□ -0.38
VGLL1Q99990 AL590326.2-201ENST00000625139 305 ntBASIC12.68□□□□□ -0.38
VGLL1Q99990 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.68□□□□□ -0.38
VGLL1Q99990 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 AC243591.1-201ENST00000452967 1364 ntBASIC12.68□□□□□ -0.38
VGLL1Q99990 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.68□□□□□ -0.38
VGLL1Q99990 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.68□□□□□ -0.38
VGLL1Q99990 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VGLL1Q99990 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms