Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.38■□□□□ 0.37
SMOQ99835 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.38■□□□□ 0.37
SMOQ99835 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.38■□□□□ 0.37
SMOQ99835 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.38■□□□□ 0.37
SMOQ99835 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMOQ99835 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMOQ99835 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
SMOQ99835 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMOQ99835 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.37■□□□□ 0.37
SMOQ99835 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 AC093724.1-201ENST00000448659 1027 ntBASIC17.37■□□□□ 0.37
SMOQ99835 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 AC004449.1-201ENST00000564240 433 ntBASIC17.37■□□□□ 0.37
SMOQ99835 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.37■□□□□ 0.37
SMOQ99835 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.37■□□□□ 0.37
SMOQ99835 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SMOQ99835 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMOQ99835 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.37■□□□□ 0.37
SMOQ99835 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMOQ99835 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SMOQ99835 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.36■□□□□ 0.37
SMOQ99835 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.36■□□□□ 0.37
SMOQ99835 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.36■□□□□ 0.37
SMOQ99835 SPDYE14P-201ENST00000442619 822 ntBASIC17.36■□□□□ 0.37
SMOQ99835 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.36■□□□□ 0.37
SMOQ99835 ALG1L8P-201ENST00000533887 760 ntBASIC17.36■□□□□ 0.37
SMOQ99835 AC026150.2-201ENST00000564693 1156 ntBASIC17.36■□□□□ 0.37
SMOQ99835 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.36■□□□□ 0.37
SMOQ99835 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMOQ99835 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.36■□□□□ 0.37
SMOQ99835 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMOQ99835 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMOQ99835 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SMOQ99835 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMOQ99835 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SMOQ99835 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.35■□□□□ 0.37
SMOQ99835 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
SMOQ99835 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms