Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.77□□□□□ -0.05
SPENQ96T58 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
SPENQ96T58 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 AL133338.1-201ENST00000565695 1517 ntBASIC14.77□□□□□ -0.05
SPENQ96T58 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SPENQ96T58 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.77□□□□□ -0.05
SPENQ96T58 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 AC123567.1-201ENST00000548294 1261 ntBASIC14.77□□□□□ -0.05
SPENQ96T58 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 PCDH8P1-201ENST00000428983 2773 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.76□□□□□ -0.05
SPENQ96T58 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.76□□□□□ -0.05
SPENQ96T58 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.76□□□□□ -0.05
SPENQ96T58 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SPENQ96T58 RN7SL828P-201ENST00000607615 303 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.76□□□□□ -0.05
SPENQ96T58 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 AL603756.1-201ENST00000606511 2163 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 AC080080.1-201ENST00000625121 2420 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.76□□□□□ -0.05
SPENQ96T58 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.76□□□□□ -0.05
SPENQ96T58 MIR8072-201ENST00000614241 80 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SPENQ96T58 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.76□□□□□ -0.05
SPENQ96T58 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 AC092933.1-201ENST00000393644 945 ntBASIC14.76□□□□□ -0.05
SPENQ96T58 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.76□□□□□ -0.05
SPENQ96T58 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.76□□□□□ -0.05
SPENQ96T58 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPENQ96T58 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.76□□□□□ -0.05
SPENQ96T58 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.75□□□□□ -0.05
SPENQ96T58 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.75□□□□□ -0.05
SPENQ96T58 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 AC099336.1-201ENST00000417053 1171 ntBASIC14.75□□□□□ -0.05
SPENQ96T58 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.75□□□□□ -0.05
SPENQ96T58 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.75□□□□□ -0.05
SPENQ96T58 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.75□□□□□ -0.05
SPENQ96T58 AL589702.1-201ENST00000641229 1509 ntBASIC14.75□□□□□ -0.05
SPENQ96T58 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
SPENQ96T58 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.75□□□□□ -0.05
SPENQ96T58 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.75□□□□□ -0.05
SPENQ96T58 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.75□□□□□ -0.05
SPENQ96T58 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.75□□□□□ -0.05
SPENQ96T58 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.75□□□□□ -0.05
SPENQ96T58 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.75□□□□□ -0.05
SPENQ96T58 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPENQ96T58 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.75□□□□□ -0.05
SPENQ96T58 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.74□□□□□ -0.05
SPENQ96T58 RN7SL618P-201ENST00000477850 296 ntBASIC14.74□□□□□ -0.05
SPENQ96T58 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.74□□□□□ -0.05
SPENQ96T58 AP005482.1-201ENST00000563722 1273 ntBASIC14.74□□□□□ -0.05
SPENQ96T58 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 AC006277.1-201ENST00000624348 1610 ntBASIC14.74□□□□□ -0.05
SPENQ96T58 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.74□□□□□ -0.05
SPENQ96T58 AC087499.6-201ENST00000411576 835 ntBASIC14.74□□□□□ -0.05
SPENQ96T58 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.74□□□□□ -0.05
SPENQ96T58 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.74□□□□□ -0.05
SPENQ96T58 PDIA3P1-201ENST00000471856 1510 ntBASIC14.74□□□□□ -0.05
SPENQ96T58 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SPENQ96T58 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SPENQ96T58 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.74□□□□□ -0.05
SPENQ96T58 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.74□□□□□ -0.05
SPENQ96T58 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.74□□□□□ -0.05
SPENQ96T58 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.74□□□□□ -0.05
SPENQ96T58 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms