Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AC073439.1-201ENST00000624121 1774 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AL031731.1-201ENST00000642131 2094 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 CROCCP1-201ENST00000426910 5675 ntBASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 AC142381.1-201ENST00000426099 345 ntBASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK5RAP1Q96SZ6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDK5RAP1Q96SZ6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CDK5RAP1Q96SZ6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 AL138918.1-201ENST00000568306 659 ntBASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 AC093028.1-201ENST00000622998 982 ntBASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK5RAP1Q96SZ6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK5RAP1Q96SZ6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms