Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 RRP7BP-205ENST00000566851 833 ntBASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CRAMP1Q96RY5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.1■□□□□ 0.81
CRAMP1Q96RY5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 TMEM261P1-201ENST00000604899 340 ntBASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 AL512343.1-201ENST00000605837 169 ntBASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.09■□□□□ 0.81
CRAMP1Q96RY5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 GGT4P-201ENST00000623672 1708 ntBASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms