Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC00982-205ENST00000420957 435 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 FDX1P1-201ENST00000449115 551 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 KRT16P4-201ENST00000453883 522 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 AC097637.2-201ENST00000624096 1997 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 AC004817.3-201ENST00000602957 2129 ntBASIC15.23■□□□□ 0.03
SNX18Q96RF0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.22■□□□□ 0.03
SNX18Q96RF0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SNX18Q96RF0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 LINC00895-201ENST00000629028 1637 ntBASIC15.21■□□□□ 0.03
SNX18Q96RF0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 RNF216P1-203ENST00000404404 2427 ntBASIC15.21■□□□□ 0.03
SNX18Q96RF0 AP005117.1-201ENST00000584346 1413 ntBASIC15.21■□□□□ 0.03
SNX18Q96RF0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 AC009078.2-202ENST00000463353 338 ntBASIC15.21■□□□□ 0.03
SNX18Q96RF0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 AL591684.3-201ENST00000605187 298 ntBASIC15.21■□□□□ 0.03
SNX18Q96RF0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SNX18Q96RF0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.21■□□□□ 0.03
SNX18Q96RF0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms