Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.65□□□□□ -0.38
AP1S3Q96PC3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 ECEL1P3-201ENST00000427961 737 ntBASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AL136038.4-201ENST00000603606 1261 ntBASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC004263.2-201ENST00000617183 678 ntBASIC12.65□□□□□ -0.38
AP1S3Q96PC3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC079328.2-201ENST00000561241 3354 ntBASIC12.65□□□□□ -0.38
AP1S3Q96PC3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP1S3Q96PC3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
AP1S3Q96PC3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
AP1S3Q96PC3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 AL513523.2-202ENST00000427283 2040 ntBASIC12.64□□□□□ -0.39
AP1S3Q96PC3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 INGX-201ENST00000359239 846 ntBASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms