Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 AC008894.3-201ENST00000624324 3103 ntBASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 FDX1P1-201ENST00000449115 551 ntBASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 AC023141.13-201ENST00000604991 943 ntBASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDLIM5Q96HC4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AC092474.2-201ENST00000424288 719 ntBASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 REXO1L8P-201ENST00000604378 1897 ntBASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDLIM5Q96HC4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms