Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 ELK2BP-201ENST00000415014 1224 ntBASIC17.07■□□□□ 0.32
CCDC97Q96F63 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 LINC01922-201ENST00000562582 719 ntBASIC17.07■□□□□ 0.32
CCDC97Q96F63 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 AL353135.1-201ENST00000606729 504 ntBASIC17.07■□□□□ 0.32
CCDC97Q96F63 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC97Q96F63 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC97Q96F63 AC006504.4-201ENST00000592118 1568 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 RPSAP43-201ENST00000402237 625 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 GPX1P2-201ENST00000429271 606 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 AC092910.1-201ENST00000482027 1129 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 RNA5SP416-201ENST00000516838 111 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 AP001160.2-201ENST00000596071 487 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 AC107918.4-202ENST00000641623 219 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 PCDHA1-201ENST00000378133 2726 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 LINC02012-201ENST00000608206 1725 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 AL161772.1-201ENST00000610494 4412 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 EGFEM1P-202ENST00000431685 1563 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 AC092068.3-201ENST00000587894 2016 ntBASIC17.06■□□□□ 0.32
CCDC97Q96F63 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC97Q96F63 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC97Q96F63 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 AL590787.1-201ENST00000568856 1315 ntBASIC17.05■□□□□ 0.32
CCDC97Q96F63 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC97Q96F63 ACTG1P4-201ENST00000425123 1122 ntBASIC17.05■□□□□ 0.32
CCDC97Q96F63 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC97Q96F63 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms