Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL078644.1-201ENST00000609881 752 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AC092068.3-201ENST00000587894 2016 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AL021920.2-201ENST00000624828 1351 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 AC112191.1-201ENST00000523689 701 ntBASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 AL031432.2-201ENST00000566714 459 ntBASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 AL928711.1-201ENST00000570165 459 ntBASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 AC046158.3-201ENST00000624947 2558 ntBASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SH3KBP1Q96B97 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SH3KBP1Q96B97 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 AC005915.1-201ENST00000624912 2018 ntBASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SH3KBP1Q96B97 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms