Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.7■□□□□ 0.58
USP6NLQ92738 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.7■□□□□ 0.58
USP6NLQ92738 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 AC124947.2-201ENST00000547118 1133 ntBASIC18.7■□□□□ 0.58
USP6NLQ92738 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.7■□□□□ 0.58
USP6NLQ92738 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6NLQ92738 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6NLQ92738 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6NLQ92738 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.69■□□□□ 0.58
USP6NLQ92738 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC011495.1-201ENST00000498085 584 ntBASIC18.69■□□□□ 0.58
USP6NLQ92738 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.69■□□□□ 0.58
USP6NLQ92738 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
USP6NLQ92738 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.69■□□□□ 0.58
USP6NLQ92738 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.69■□□□□ 0.58
USP6NLQ92738 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP6NLQ92738 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USP6NLQ92738 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USP6NLQ92738 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.68■□□□□ 0.58
USP6NLQ92738 SPDYE17-201ENST00000412399 783 ntBASIC18.68■□□□□ 0.58
USP6NLQ92738 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.68■□□□□ 0.58
USP6NLQ92738 KRT17P8-201ENST00000540749 863 ntBASIC18.68■□□□□ 0.58
USP6NLQ92738 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.68■□□□□ 0.58
USP6NLQ92738 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.68■□□□□ 0.58
USP6NLQ92738 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.68■□□□□ 0.58
USP6NLQ92738 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USP6NLQ92738 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 TUBB8P12-201ENST00000308911 1335 ntBASIC18.68■□□□□ 0.58
USP6NLQ92738 TUBB7P-202ENST00000428444 1305 ntBASIC18.68■□□□□ 0.58
USP6NLQ92738 TUBB8P7-204ENST00000567960 1332 ntBASIC18.68■□□□□ 0.58
USP6NLQ92738 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP6NLQ92738 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP6NLQ92738 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms