Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 GNRHR2-203ENST00000581100 1187 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC138466.3-201ENST00000619983 221 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC004461.2-201ENST00000629517 803 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PHGDH-209ENST00000641074 1780 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AL645933.1-201ENST00000440087 609 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 RHOQP2-201ENST00000449922 579 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC023906.1-201ENST00000486386 453 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC242376.1-201ENST00000559033 726 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC093752.3-201ENST00000567343 901 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AL008707.1-201ENST00000422498 534 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RPL7P35-201ENST00000446943 740 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RBM4-207ENST00000506523 654 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 PHF23-213ENST00000613632 850 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 KRT8P35-201ENST00000483942 1338 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 HNRNPA1P63-201ENST00000427917 963 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC005412.3-201ENST00000580309 715 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 LINC00431-202ENST00000636375 159 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC125437.2-201ENST00000625180 2167 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC124947.2-201ENST00000547118 1133 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 KRT127P-201ENST00000547183 433 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC079331.1-201ENST00000623200 1200 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC068587.8-201ENST00000641239 219 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RNU1-129P-201ENST00000384064 167 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 U1.21-201ENST00000580816 167 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 INTS4P2-202ENST00000614726 2019 ntBASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE2Q8WXH0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms