Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 AC136621.1-201ENST00000624017 2304 ntBASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L1Q8WWY6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 GRK6P1-201ENST00000400595 1711 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 AC003669.1-201ENST00000334569 611 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 INGX-201ENST00000359239 846 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 AP002414.1-201ENST00000391405 1147 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 AC128688.1-201ENST00000487626 519 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 AC023908.3-201ENST00000564211 3047 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CICP24-201ENST00000605464 2705 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 AL512652.2-201ENST00000625156 1716 ntBASIC13.08□□□□□ -0.32
MBD3L1Q8WWY6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 SNX33P1-201ENST00000592116 1762 ntBASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 AC005089.1-201ENST00000619486 2241 ntBASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 RASA4DP-201ENST00000460726 1199 ntBASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L1Q8WWY6 AP003071.4-201ENST00000562276 1284 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms