Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNED1Q8TER0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNED1Q8TER0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNED1Q8TER0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNED1Q8TER0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNED1Q8TER0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNED1Q8TER0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 AL512652.2-201ENST00000625156 1716 ntBASIC19.96■□□□□ 0.79
SNED1Q8TER0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
SNED1Q8TER0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 AC074044.1-201ENST00000609673 707 ntBASIC19.95■□□□□ 0.78
SNED1Q8TER0 MIR8072-201ENST00000614241 80 ntBASIC19.95■□□□□ 0.78
SNED1Q8TER0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 AC139713.2-201ENST00000641328 2723 ntBASIC19.95■□□□□ 0.78
SNED1Q8TER0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 CDC14C-201ENST00000428251 1719 ntBASIC19.95■□□□□ 0.78
SNED1Q8TER0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SNED1Q8TER0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 AC234783.1-201ENST00000441761 496 ntBASIC19.94■□□□□ 0.78
SNED1Q8TER0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.94■□□□□ 0.78
SNED1Q8TER0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SNED1Q8TER0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.94■□□□□ 0.78
SNED1Q8TER0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNED1Q8TER0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AC015936.2-201ENST00000593177 259 ntBASIC19.93■□□□□ 0.78
SNED1Q8TER0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms