Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 AC106886.4-201ENST00000623557 2502 ntBASIC17.43■□□□□ 0.38
SHKBP1Q8TBC3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 UGT1A2P-201ENST00000454886 866 ntBASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 AC021097.1-201ENST00000607902 574 ntBASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 AL390754.1-201ENST00000619088 582 ntBASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHKBP1Q8TBC3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms