Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 MTND6P24-201ENST00000440466 518 ntBASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 GNAQP1-201ENST00000444815 1067 ntBASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 WASH4P-201ENST00000564273 1246 ntBASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 AC008494.3-201ENST00000606615 944 ntBASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 AL133373.2-201ENST00000623187 2828 ntBASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.65■□□□□ 0.1
SNIP1Q8TAD8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SNIP1Q8TAD8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 FAM220BP-201ENST00000377689 816 ntBASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 MIR4525-201ENST00000580000 75 ntBASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 RN7SL828P-201ENST00000607615 303 ntBASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 AP003400.6-201ENST00000624698 740 ntBASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 AC068880.1-201ENST00000507289 2297 ntBASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.64■□□□□ 0.09
SNIP1Q8TAD8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.63■□□□□ 0.09
SNIP1Q8TAD8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms